
The fastest way to understand the biological meaning of your expression data
Interactive
Visually organize and filter results to identify biologically compelling, functionally relevant gene expression changes
Easy To Use And Purchase
Spend your time focused on biology, not on training, running statistics, or software licensing
Accurate
Based on evidence-backed insights from the Ingenuity® Knowledge Base
iReport for Human Isoform-level RNA-Seq Data
Quick Identification
Quickly identify genes that have multiple differentially expressed isoforms
Visualize Data
Visualize your data in the context of isoform view
Targeted Bibliographies
Compile targeted bibliographies with functional information on specific isoforms
The Ingenuity Knowledge Base

iReport has a broad set of features that allow you to quickly understand and visualize your data
Enrichment for Pathways, Biological Processes, and Diseases
Explore Our Webinars and see how the scientific community has used iReport to create novel discoveries
Analysis of NSCLC adenocarcinomas with and without KRAS mutations using Ingenuity iReport [50:51 minutes]
Presented by Megan Laurance, Ph.D., Ingenuity Systems
Ingenuity presents an analysis of lung adenocarcinomas with and without KRAS mutations in Ingenuity iReport and provides a demonstration of the statistical analysis and biological interpretation. The analysis strategies presented will be applied to RNA-Seq data made publicly available by Dr. Krishna Kalari at the Mayo Clinic. The webinar will be presented by Dr. Megan Laurance, Staff Scientist at Ingenuity Systems.
Strategies for Identifying Biologically Compelling Genes from Breast Cancer Subtype RNA-Seq Profiles [49:10 minutes]
Presented by Megan Laurance, Ph.D., Ingenuity Systems
Megan demonstrates analysis strategies and best practices for identifying the most biologically-relevant genes from expression profiles of breast cancer cell lines. The analysis utilizes new tools and workflows in Ingenuity® iReport™ to help researchers rapidly identify subsets of differentially expressed genes connected to the functional endpoints and phenotypes most relevant to breast cancer subtypes, with an aim of identifying genes to take back to the lab for validation studies. The analysis strategies presented in this webinar can be applied to a variety of gene expression datasets, including RNA-Seq and microarray experiments.
Gene Expression Analysis Using Ingenuity iReport to Analyze Response to H1N1 Influenza [49:58 minutes]
Presented by Jamie L. Fornak, Ph.D. MPH
This webinar uses previously published data from an influenza study to demonstrate the ability of Ingenuity® iReport™ to correctly identify expected results and gain additional novel biological insights from gene expression data. Lee et al. originally performed gene expression analysis on human type-I like alveolar epithelial cells that were mock infected or infected with seasonal H1N1or pandemic H1N1. Two separate iReport analyses were generated from this dataset: one comparing mock infection to seasonal H1N1 infection and another comparing mock infection to pandemic H1N1 infection. See how iReport expanded the insights described in the original publication and provided additional genes of interest for potential follow up studies in the areas of transcription and mRNA transport.
Understanding Maternal Hypercholesterolemia Effect on Offspring: Microarray Data Analysis with Ingenuity® iReport [1:05:35 minutes]
Presented by Megan Laurance, Ph.D., Ingenuity Systems
This webinar will introduce Ingenuity iReport and demonstrate how it can be used to get a rapid and accurate biological understanding of expression data coming straight off the machines, without using intermediary statistical software or bioinformatics tools. The example used is a cardiovascular dataset and we'll demonstrate how iReport can quickly help you identify genes and gene networks implicated in observed phenotypical changes.
SAMPLE REPORTS
- GSE6134: Maternal hypercholesterolemia effect on offspring: carotid artery

- Deep Sequence Analysis of Non-Small Cell Lung Cancer

- Gene Expression Profiles for 2 Cell Lines Representing 2 Breast Cancer Subtypes

- Effect of GRHL2 (grainyhead) in HMLE+Twist-ER+4-OHT cells

- GSE32455: Cancer stem cell subpopulations within the CD44high human breast cancer stem cell compartment

- RNA-Seq isoform data from Ewing Sarcoma patient: metastatic vs. primary tumor

Support Documents
SCIENTIFIC POSTERS
iREPORT VIDEOS
- Introducing Ingenuity iReport [7:78 minutes]

- Find Gene Expression Changes [3:21 minutes]

- Identify Compelling Genes [3:11 minutes]

- Impact of Single-Gene Knock Down [4:46 minutes]

- Strategies for a more rapid biological understanding of expression data [1:05:35 minutes]

- ABRF 2012 Talk: Core Lab Directors Discuss Benefits of Implementing Ingenuity iReport [42:05 minutes]

Links
- Improving Gene-Expression Data Analysis Statistical and Biological Review of Transcriptome Data Made Possible by Interactive Report

- General Background on Best Practices in Analysis of Gene Expression Data: “Finding the Right Questions: Exploratory Pathway Analysis to Enhance Biological Discovery in Large Datasets

Scientific Publications
- new Evidence of a Functional Estrogen Receptor in Parathyroid Adenomas

- new 8-Oxoguanine DNA Glycosylase (OGG1) Deficiency Increases Susceptibility to Obesity and Metabolic Dysfunction

- new Prostaglandin E2 Promotes Cellular Recovery From Established Nephrotoxic Serum Nephritis In Mice, Prosurvival and Regenerative effects On Glomerular Cells




