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Case Study: Semmelweis University


  • Solved the following challenges since deploying IPA for RNA sequencing analysis:
    • Improved understanding of the structure of different isoforms
    • Improved precise measurement of transcripts
    • Can now distinguish different isoforms
    • Can more clearly identify biologically relevant isoforms
  • Purchased IPA for RNA sequencing analysis for the following reasons:
    • Interpret the impact of expression changes in the context of biological processes, disease and cellular phenotypes, and molecular interactions

Use Case

  • Uses the following species in their RNA seq analysis:
    • Humans
  • Uses the following upstream analysis packages to generate RNA-Seq expression values:
    • CLC bio


  • Purchased IPA for RNA seq analysis over the following competitors:
    • In-house developed software
    • CLC Genomic Workbench
  • Rates the following IPA capabilities compared to the competition:
    • Faster time to insights: differentiated
    • Ease of use: differentiated


user-green2“[IPA provides] complex, integrated analysis, pathway analysis, and super visualization.”

Attila Patocs, Associate Professor, Semmelweis University

Source: TechValidate. TVID: F44-4A1-401