Library

Library Overview

Ingenuity Datasheets 

Title Topic Download IPA Datasheet Learn how IPA provides unique insight and understanding into the complex biological and chemical systems at the core of life science research. SNPs Datasheet Learn how to analyze Affymetrix SNP Identifiers in IPA. IPA Integration Module (IPA-IM) Learn how to link third-party or internal applications directly to IPA to streamline workflows and take full advantage of IPA’s search and analysis capabilities Ingenuity Single Sign On (SSO) Integration Package Access IPA directly through an existing enterprise infrastructure for improved access, integration, and security Ingenuity WebASK Ask sophisticated and targeted biological questions of Ingenuity’s knowledge base with this query tool designed for computational biologists Scientific Services Datasheet Learn more about the Scientific Services Ingenuity offers. Ingenuity Publication List View Ingenuity Systems complete list of publications.

Application Notes / White papers 

Title Topic Download Path Designer in IPA Create publication-quality graphics that are integrated with Ingenuity’s knowledge base to clearly communicate experimental insights and system models. IPA Integration Module Easy-to-use module allows researchers to quickly integrate IPA's content and analysis capabilities into their internal tools and workflows. Search and Explore in IPA Learn how to rapidly generate of testable hypotheses and streamline experimental planning ROI for Pathways Analysis Third party white paper on the Return on Investment of IPA in pharmaceutical R&D. Safety Assessment of Lead Compounds and Insight Into Molecular Mechanisms of Hepatotoxicity Learn about the advances in understanding molecular mechanisms of toxicity. Analysis of Circadian Regulation of Gene Expression in the Liver IPA identifies cellular processes, pathways, and liver functions. Novel Molecular Mechanisms of Immune Systems Regulation IPA identifies the downstream effects of targeting a novel immune system regulator. Molecular Network Shift With Progression to Metastatic Prostate Cancer Analysis of gene expression signatures from patient tumor samples. Identify Putative Biomarkers of Childhood Leukemia Disease Subtypes Highlights of a biomarker discovery workflow. Analysis Identifies Perturbed Energy Pathways in Skeletal Muscle Tissue From a Subset of Morbidly Obese Patients Learn how to build molecular models of disease states and develop appropriate strategies. Application to Elucidate Distinct Transcriptional Responses of a Series of Synthetic Toll-Like Receptor 4 Agonists Understanding the differential activities of Toll-Like Receptor 4 (TLR4) agonists.

Web Seminars / Videos 

Title Topic Download What is IPA? Learn what IPA is and how it can help in your research. IPA Overview & Demo Walk through the major features and functionalities in IPA. What's New in IPA 6 Learn about the new features and functionality within IPA 6 IPA-Biomarker™ Analysis Learn how IPA-Biomarker can identify the most promising and relevant biomarker candidates. IPA-Tox™ Analysis Learn how IPA-Tox can assess the toxicity and safety of your candidate compounds. Oncology Web Seminar * Learn how IPA can be applied to your oncology research WebEx* New Trends for mRNA Expression Profiling Asuragen and Ingenuity Systems discuss how both tools can be used for effective mRNA expression profiling *Requires the WebEx player for viewing.

Posters 

Title Topic Download New Biomarker Capability in IPA 5.0 Applying IPA-Biomarker™ for Analysis of Morbid Obesity. New Toxicology Capability in IPA 5.0 Applying IPA-Tox™ for Efficient Evaluation of Compound Toxicity and Safety. IPA Pathways to Discovery Leveraging Pathways to Gain Novel Insights into Biology for Drug Discovery, Development, and Clinical Studies. Collaboration Pathways Tools Collaboration Pathways Tools: Gaining Novel Insights and Biological Understanding Through Cross Functional Sharing of Expression Data Analysis. Generation of de novo Pathways Using Gene Expression Data (AACR 2004) Rapid Generation of de novo Biological Pathways from Large-Scale Gene Expression Data Using the Ingenuity Pathways Analysis Application. Understanding Microarray Data Sets (DDT 2004) Making Sense of it All: A New Approach to Gaining Novel Insights and Biological Understanding of Clinical Microarray Data for Drug Discovery and Development. Predictive Technology and Preclinical Development Using Pathways for Prediction: A New approach for Gaining Novel Insights and Biological Understanding of Toxiogenomic Expression Data.

Citing IPA in Your Research 

Title Topic Download Guidelines for Citing IPA in Publications Access this resource to help you cite IPA in your research.

Partner Downloads 

Title Topic Video Link Download Agilent GeneSpring GeneSpring GX Connector to Ingenuity's IPA WebEx* link Rosetta Resolver Resolver Custom Command to Ingenuity's IPA     Spotfire DecisionSite Connector to Ingenuity's IPA WebEx* link *Requires the WebEx player for viewing.

Newsletters 

Company 

Title Topic Download Corporate Backgrounder Learn more about Ingenuity Systems