proteomics
proteomic
Additional Information

For additional information about our products, please contact us at:

products@ingenuity.com
or call (1) 650.381.5056

proteomics
protein expression
proteomic
 

Welcome to the Ingenuity Systems Library. This library contains a list of references and resources that will help you learn more about our products and services.



Library Overview

Ingenuity Datasheets
Application Notes / White Papers
Web Seminars / Videos
Posters
Citing IPA in your research
Partner Downloads
Newsletters
Company

Ingenuity Datasheets 

Title Topic Download
IPA Datasheet Learn how IPA provides unique insight and understanding into the complex biological and chemical systems at the core of life science research. PDF
SNPs Datasheet Learn how to analyze Affymetrix SNP Identifiers in IPA. PDF
IPA Integration Module (IPA-IM) Learn how to link third-party or internal applications directly to IPA to streamline workflows and take full advantage of IPA’s search and analysis capabilities PDF
Ingenuity Single Sign On (SSO) Integration Package Access IPA directly through an existing enterprise infrastructure for improved access, integration, and security PDF
Ingenuity WebASK Ask sophisticated and targeted biological questions of Ingenuity’s knowledge base with this query tool designed for computational biologists PDF
Scientific Services Datasheet Learn more about the Scientific Services Ingenuity offers. PDF
Ingenuity Publication List View Ingenuity Systems complete list of publications. PDF

Application Notes / White papers 

Title Topic Download
Path Designer in IPA Create publication-quality graphics that are integrated with Ingenuity’s knowledge base to clearly communicate experimental insights and system models. PDF
IPA Integration Module Easy-to-use module allows researchers to quickly integrate IPA's content and analysis capabilities into their internal tools and workflows.
PDF
Search and Explore in IPA Learn how to rapidly generate of testable hypotheses and streamline experimental planning
PDF
ROI for Pathways Analysis Third party white paper on the Return on Investment of IPA in pharmaceutical R&D. PDF
Safety Assessment of Lead Compounds and Insight Into Molecular Mechanisms of Hepatotoxicity Learn about the advances in understanding molecular mechanisms of toxicity. PDF
Analysis of Circadian Regulation of Gene Expression in the Liver IPA identifies cellular processes, pathways, and liver functions. PDF
Novel Molecular Mechanisms of Immune Systems Regulation IPA identifies the downstream effects of targeting a novel immune system regulator. PDF
Molecular Network Shift With Progression to Metastatic Prostate Cancer Analysis of gene expression signatures from patient tumor samples. PDF
Identify Putative Biomarkers of Childhood Leukemia Disease Subtypes Highlights of a biomarker discovery workflow. PDF
Analysis Identifies Perturbed Energy Pathways in Skeletal Muscle Tissue From a Subset of Morbidly Obese Patients Learn how to build molecular models of disease states and develop appropriate strategies. PDF
Application to Elucidate Distinct Transcriptional Responses of a Series of Synthetic Toll-Like Receptor 4 Agonists Understanding the differential activities of Toll-Like Receptor 4 (TLR4) agonists. PDF

Web Seminars / Videos 

Title Topic Download
What is IPA? Learn what IPA is and how it can help in your research. Flash
IPA Overview & Demo Walk through the major features and functionalities in IPA. Flash
What's New in IPA 6 Learn about the new features and functionality within IPA 6 Flash
IPA-Biomarker™ Analysis Learn how IPA-Biomarker can identify the most promising and relevant biomarker candidates. Flash
IPA-Tox™ Analysis Learn how IPA-Tox can assess the toxicity and safety of your candidate compounds. Flash
Oncology Web Seminar * Learn how IPA can be applied to your oncology research WebEx*
New Trends for mRNA Expression Profiling Asuragen and Ingenuity Systems discuss how both tools can be used for effective mRNA expression profiling Flash
*Requires the WebEx player for viewing.

Posters 

Title Topic Download
New Biomarker Capability in IPA 5.0 Applying IPA-Biomarker™ for Analysis of Morbid Obesity. PDF
New Toxicology Capability in IPA 5.0 Applying IPA-Tox™ for Efficient Evaluation of Compound Toxicity and Safety. PDF
IPA Pathways to Discovery Leveraging Pathways to Gain Novel Insights into Biology for Drug Discovery, Development, and Clinical Studies. PDF
Collaboration Pathways Tools Collaboration Pathways Tools: Gaining Novel Insights and Biological Understanding Through Cross Functional Sharing of Expression Data Analysis. PDF
Generation of de novo Pathways Using Gene Expression Data (AACR 2004) Rapid Generation of de novo Biological Pathways from Large-Scale Gene Expression Data Using the Ingenuity Pathways Analysis Application. PDF
Understanding Microarray Data Sets (DDT 2004) Making Sense of it All: A New Approach to Gaining Novel Insights and Biological Understanding of Clinical Microarray Data for Drug Discovery and Development. PDF
Predictive Technology and Preclinical Development Using Pathways for Prediction: A New approach for Gaining Novel Insights and Biological Understanding of Toxiogenomic Expression Data. PDF

Citing IPA in Your Research 

Title Topic Download
Guidelines for Citing IPA in Publications Access this resource to help you cite IPA in your research. PDF

Partner Downloads 

Title Topic Video Link Download
Agilent GeneSpring GeneSpring GX Connector to Ingenuity's IPA WebEx* link PDF
Rosetta Resolver Resolver Custom Command to Ingenuity's IPA     PDF
Spotfire DecisionSite Connector to Ingenuity's IPA WebEx* link PDF
*Requires the WebEx player for viewing.

Newsletters 

Title Topic
Ingenuity Insider Newsletter, Spring 2008 Read about the exceptional research being performed using Ingenuity Pathways Analysis.
Ingenuity Insider Newsletter, Fall 2007 Read about the exceptional research being performed using Ingenuity Pathways Analysis.
Ingenuity Insider Newsletter, Spring 2007 Read about the exceptional research being performed using Ingenuity Pathways Analysis.
Ingenuity Insider Newsletter, Spring 2006 Learn about the new toxicology and biomarker capabilities in IPA
Ingenuity Insider Newsletter, Fall 2006 Learn about the new search features and metabolomics capabilities in IPA

Company 

Title Topic Download
Corporate Backgrounder Learn more about Ingenuity Systems PDF